rs6592864 chr11:70913018 C>T

Sequence
ttacagtctcagggaactgaacta[C/T]agattctaagccagttcctcattc
ASB in cell types
CTV-1 (Adult T acute lymphoblastic leukemia) MDM(monocyte derived macrophages)
ASB for transcription factors
SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 1.56 0.30 1.1·10-31.00 1.27 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP hip bone mineral density (bmd),  intracranial aneurysm (female),  ldl cholesterol,  refractive error,  sporadic creutzfeldt-jakob disease
GTEx eQTL Brain_Spinal_cord_cervical_c-1

Download