rs6593448 chr10:44913491 C>T
- Sequence
cacacacacacaaacccgtgcgcg[C/T]gcacatagggctcgtcttaaccac
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NRF1_HUMAN GABP1_HUMAN MEIS2_HUMAN ZN639_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | 3.21 | -5.49 | 1.67 | 2.74 | Discordant | |||
| GABP1_HUMAN | 2.73 | -2.51 | 1.00 | n/a | n/a | |||
| MEIS2_HUMAN | 1.94 | -1.94 | 1.00 | n/a | No Hit | |||
| ZN639_HUMAN | 3.28 | -1.01 | 1.33 | n/a | n/a | |||
| KDM1A_HUMAN | 1.09 | 0.79 | 1.12 | n/a | n/a |
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Motif analysis
