rs6594955 chr5:116155092 T>C

Sequence
agcacacatgagatcctggaaaca[T/C]atgagaccttggcatacattgact
ASB in cell types
HepG2 (hepatoblastoma)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HepG2 (hepatoblastoma) -3.52 1.90 1.000.05 1.50
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Motif analysis

No data available

Genetic associations

GRASP parkinsons disease
GTEx eQTL Brain_Cerebellar_Hemisphere,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Heart_Left_Ventricle,  Muscle_Skeletal,  Pituitary,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Testis,  Thyroid

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