rs6595569 chr5:125017906 G>A
- Sequence
gaatcactcttaaatattgacact[G/A]tacacaagaaaggaagactgacat
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXA3_HUMAN TBX3_HUMAN FOXA2_HUMAN NR2F6_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA3_HUMAN | 3.23 | -5.30 | 1.50 | 0.60 | Weak Discordant | |||
| TBX3_HUMAN | 2.96 | -3.10 | 1.00 | n/a | No Hit | |||
| FOXA2_HUMAN | 1.85 | -1.42 | 1.00 | -0.44 | Weak Concordant | |||
| NR2F6_HUMAN | 2.50 | n/a | 1.50 | n/a | No Hit |
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Motif analysis
