rs6596017 chr5:131337254 G>C

Sequence
ccactccagaccctgtttgcctgg[G/C]tatcaccagcggtggctgcagaac
ASB in cell types
WA01 (H1, human embryonic stem cells) embryonic stem cells
ASB for transcription factors
TIF1B_HUMAN ZN486_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TIF1B_HUMAN 1.69 -0.21 7.4·10-61.00 1.10 n/a n/a
ZN486_HUMAN 0.91 -0.55 0.041.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia Cells_Cultured_fibroblasts Whole_Blood

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