rs6596397 chr5:137592813 A>T
- Sequence
aagctctaaaattaattgccatga[A/T]ggttttacaactctggacatacta
- ASB in cell types
- naive endoderm
- ASB for transcription factors
- CDX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDX2_HUMAN | -0.50 | 2.41 | 1.00 | -2.35 | Discordant |
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Motif analysis
