rs6598475 chr15:101446425 G>T
- Sequence
atggacacgtggattactcccact[G/T]cttggctgctgggaataatgctgc
- ASB in cell types
- K562 (myelogenous leukemia) HUVEC-C (HUVEC, umbilical vein endothelial cells) HEK293 (embryonic kidney) pulmonary artery endothelial cell
- ASB for transcription factors
- IKZF1_HUMAN TF65_HUMAN MEIS2_HUMAN ARNT_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 0.26 | 1.57 | 1.60 | n/a | n/a | |||
| TF65_HUMAN | 0.17 | 2.59 | 2.33 | n/a | No Hit | |||
| MEIS2_HUMAN | n/a | 1.74 | 2.00 | n/a | No Hit | |||
| ARNT_HUMAN | -0.69 | 2.43 | 1.75 | n/a | No Hit | |||
| MEF2D_HUMAN | n/a | 1.69 | 2.00 | n/a | No Hit |
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