rs6598886 chr1:27522789 T>C

Sequence
accgtgtctttgtgtgtttcgggt[T/C]gcctgaatgtgcacaggcggagga
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.60 n/a 0.031.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol neuroticism psoriasis type 2 diabetes, combined control dataset
GTEx eQTL Adrenal_Gland Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Hippocampus Brain_Hypothalamus Heart_Left_Ventricle Thyroid

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