rs6598892 chr1:27656792 A>G
- Sequence
ctgacacctaggggctctttcagg[A/G]ttaggtgagcttgcacatgccctc
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines) GM02630 (Fanconi anemi)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.57 | 0.01 | 1.22 | n/a | No Hit | |||
| STAG1_HUMAN | 1.83 | -0.20 | 1.00 | n/a | n/a |
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