rs6600866 chr4:69058053 T>A
- Sequence
aatgctcgcagttcaagccgagag[T/A]aatcagctgtgctggcagctacaa
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | 1.12 | 1.04 | 1.03 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Breast_Mammary_Tissue, Lung, Minor_Salivary_Gland, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid