rs6602514 chr10:6203354 G>T
- Sequence
cccagatgtgagtgcagctgcgcg[G/T]agccgggttgcagggcgggctgcg
- ASB in cell types
- 22RV1 (prostate carcinoma) HepG2 (hepatoblastoma) gastrocnemius medialis
- ASB for transcription factors
- TYY1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | 2.58 | -3.02 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, ldl cholesterol