rs6610483 chrX:40945566 T>A
- Sequence
ttcacttctcacttcggctcatgt[T/A]tccttgtgctgattgggaagtaag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF1_HUMAN IKZF2_HUMAN BHE40_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.64 | n/a | 2.50 | n/a | n/a | |||
| IKZF2_HUMAN | 2.21 | n/a | 2.00 | n/a | n/a | |||
| BHE40_HUMAN | 2.47 | n/a | 2.50 | n/a | No Hit |
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