rs6631916 chrX:15198915 G>C
- Sequence
tcttgtgagacttattcactgtca[G/C]aagaacagcatgggaaaaacctgc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF1_HUMAN IKZF2_HUMAN MEF2B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | n/a | 3.24 | 4.00 | n/a | n/a | |||
| IKZF2_HUMAN | n/a | 2.28 | 4.00 | n/a | n/a | |||
| MEF2B_HUMAN | n/a | 2.54 | 3.00 | 3.39 | Concordant |
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Motif analysis
