rs6645262 chrX:1504524 G>A
- Sequence
gctaccataaggatcccacgtgct[G/A]gaaacttccctctgttgaaatgtt
- ASB in cell types
- macrophages form periferal blood GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- TF65_HUMAN FOXK2_HUMAN ELF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 2.58 | n/a | 3.00 | -2.70 | Concordant | |||
| FOXK2_HUMAN | -1.98 | 2.37 | 1.00 | n/a | No Hit | |||
| ELF1_HUMAN | 0.24 | 1.20 | 1.25 | n/a | No Hit |
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Motif analysis
