rs6645595 chrX:119730209 T>C
- Sequence
tgcgacacacgcctgtaatcccag[T/C]actttgggaggccgaggcaggcgg
- ASB in cell types
- HEK293 (embryonic kidney) GM12890 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- ZN654_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN654_HUMAN | 3.15 | n/a | 2.00 | n/a | n/a | |||
| STAG1_HUMAN | 1.64 | n/a | 2.17 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Cells_Cultured_fibroblasts, Colon_Transverse, Heart_Atrial_Appendage, Testis