rs6656560 chr1:208187802 G>A
- Sequence
tgttaggttctttctgatgctgct[G/A]atcagatgggtcaggtagcagaga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | 0.72 | 0.83 | 1.13 |
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Motif analysis
No data available
Genetic associations
GRASP antidepressant drug treatment outcome in depression, hip bone mineral density (bmd), refractive error, schizophrenia, variant creutzfeldt-jakob disease