rs6656995 chr1:31111422 A>T
- Sequence
ttgcacaactgcactccagccaag[A/T]ttgcgcaactgcattccagcctgg
- ASB in cell types
- SUM159PT (Triple negative breast cancer) JB6 (Human anaplastic large cell lymphoma) SU-DHL-1 (Anaplastic large cell lymphoma) K562 (myelogenous leukemia)
- ASB for transcription factors
- CEBPB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | 3.12 | n/a | 2.11 | -5.18 | Concordant |
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Motif analysis
