rs6657049 chr1:115282910 G>A

Sequence
aaagtttcacagatagaaatgggg[G/A]agctggggccagaacccagctctg
ASB in cell types
CTV-1 (Adult T acute lymphoblastic leukemia) MDM(monocyte derived macrophages) TALL1 (T-Acute Lymphoblastic Leukemia)
ASB for transcription factors
SPI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN -0.14 3.84 1.008.7·10-13 1.20 5.76 Concordant
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Motif analysis

SPI1_HUMAN Concordant
SPI1_HUMAN pic

Genetic associations

EMBL-EBI pain medicine use during menstruation
GTEx eQTL Artery_Aorta Cells_Cultured_fibroblasts Uterus

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