rs6658345 chr1:11689900 A>C
- Sequence
tgatgtcacctcactctgttccag[A/C]ctgactcttctccaccaaacacac
- ASB in cell types
- HEK293 (embryonic kidney) K562 (myelogenous leukemia)
- ASB for transcription factors
- ZN189_HUMAN NR2C1_HUMAN ZN335_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN189_HUMAN | n/a | 2.20 | 2.00 | 4.09 | Concordant | |||
| NR2C1_HUMAN | 2.57 | -0.33 | 1.25 | n/a | No Hit | |||
| ZN335_HUMAN | n/a | 2.62 | 2.00 | 4.20 | Concordant |
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Motif analysis
