rs6658406 chr1:235866175 T>C

Sequence
gggtaatttcccagcttatttaac[T/C]catcagaagcgaaggggcatctca
ASB in cell types
A549 (lung carcinoma) neutrophils from periferal blood foreskin keratinocyte
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View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
A549 (lung carcinoma) 0.96 0.08 2.9·10-41.00 2.00
neutrophils from periferal blood -0.28 2.48 1.003.7·10-3 1.50
foreskin keratinocyte n/a 1.56 1.006.6·10-3 2.50
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  adiponectin levels,  body mass index (bmi),  hdl cholesterol
GTEx eQTL Cells_Cultured_fibroblasts,  Colon_Transverse,  Skin_Not_Sun_Exposed_Suprapubic,  Thyroid

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