rs6661817 chr1:113904412 G>C
- Sequence
attgctcaagcccgtgatatggag[G/C]aaactacccagctgagtaaaagat
- ASB in cell types
- BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.82 | 0.23 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP irritible bowel syndrome, microalbuminuria, rheumatoid arthritis, type 1 diabetes, combined control dataset
GTEx eQTL Adrenal_Gland, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Muscularis, Heart_Atrial_Appendage, Muscle_Skeletal, Nerve_Tibial, Pancreas, Small_Intestine_Terminal_Ileum, Spleen, Testis, Thyroid, Whole_Blood