rs6662507 chr1:181087024 G>A
- Sequence
agagaagtgaagtaattttccaga[G/A]gccatgcagcaagtgaaaggtgaa
- ASB in cell types
- BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 0.72 | 0.63 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, anti-tnf treatment response in rheumatoid arthritis (by das-28 score change at 3 months), body mass index (bmi)