rs6667031 chr1:247937165 A>C
- Sequence
cctctttatcatcttccgcacccg[A/C]gccccgggctcactcgctggggct
- ASB in cell types
- upper lobe of left lung GM12878 (female B-cells lymphoblastoid cell line) IPSC-derived bipolar neuron GM23338
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN IRF4_HUMAN TRI22_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.47 | 1.11 | 1.52 | n/a | No Hit | |||
| RAD21_HUMAN | 1.47 | -0.19 | 1.46 | n/a | n/a | |||
| IRF4_HUMAN | 2.38 | -2.19 | 1.00 | n/a | No Hit | |||
| TRI22_HUMAN | 1.99 | -0.93 | 1.00 | n/a | n/a | |||
| ZN143_HUMAN | 1.97 | -1.66 | 1.00 | n/a | No Hit |
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