rs6669543 chr1:162011235 T>C
- Sequence
gctgcctggtaggtcctgtgggca[T/C]caggattccctggcagatagctgg
- ASB in cell types
- TMD8 (diffuse large B-cell lymphoma)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| TMD8 (diffuse large B-cell lymphoma) | 2.90 | n/a | 2.00 |
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Motif analysis
No data available
Genetic associations
GRASP hdl cholesterol change with statins, major depressive disorder (broad definition), major depressive disorder (broad definition) (females), major depressive disorder (broad definition) (males), recurrent early onset major depressive disorder (males)