rs6669871 chr1:24417003 G>A

Sequence
caccactcccttgattgacatgtc[G/A]ctaaggtctgttggctttctctga
ASB in cell types
HASM2 (Human airway smooth muscle 2)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HASM2 (Human airway smooth muscle 2) 1.81 0.85 0.050.32 1.00
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol change with statins,  total cholesterol change with statins,  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Artery_Tibial,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Esophagus_Mucosa,  Esophagus_Muscularis,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid,  Whole_Blood

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