rs6669962 chr1:165076010 T>A
- Sequence
aacatccgacaatgtgcagaccag[T/A]ccccagtaacaaagaattctcctg
- ASB in cell types
- Peyer's patch Kelly (neuroblastoma) T47D (invasive ductal carcinoma) THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.03 | 0.34 | 1.31 | n/a | No Hit | |||
| STAG1_HUMAN | 1.51 | 0.03 | 1.00 | n/a | n/a |
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