rs6671588 chr1:195664773 A>T
- Sequence
tgtgtaatgtgtatgtgcacacac[A/T]gttccaaatcaattgacattgtga
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -1.04 | 2.79 | 2.20 | 3.74 | Concordant |
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Motif analysis
