rs6671815 chr1:2276041 C>G

Sequence
tgagaattgagcaatctccttgtg[C/G]tctttcaagctgttcttttctttg
ASB in cell types
K562 (myelogenous leukemia) GM12891 (male B- cells lymphoblastoid cell line)
ASB for transcription factors
KDM1A_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KDM1A_HUMAN -1.32 2.37 1.003.5·10-3 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  cystatin c in serum,  height,  parkinsons disease,  total cholesterol,  urinary albumin-to-creatinine ratio
GTEx eQTL Artery_Tibial,  Esophagus_Muscularis,  Nerve_Tibial

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