rs6671832 chr1:173406858 C>T

Sequence
tgtgggaatcctgagaggtaatta[C/T]ggagagcttccgaatggagagcct
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line) 0.37 0.70 0.980.04 1.00
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol homa-b triglycerides
GTEx eQTL Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Muscularis Skin_Sun_Exposed_Lower_leg Testis Thyroid

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