rs6673674 chr1:221846012 T>C
- Sequence
acttggcagccacaggctgtgagg[T/C]catcttttcaccactcgctgttcc
- ASB in cell types
- HEK293 (embryonic kidney) K562 (myelogenous leukemia) pancreas HEK293T (embryonic kidney)
- ASB for transcription factors
- PRDM9_HUMAN CTCF_HUMAN ATF3_HUMAN ZN629_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PRDM9_HUMAN | 3.48 | n/a | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 1.42 | 0.37 | 1.56 | n/a | No Hit | |||
| ATF3_HUMAN | 2.82 | n/a | 3.00 | -2.45 | Concordant | |||
| ZN629_HUMAN | 2.90 | -5.13 | 2.00 | n/a | n/a | |||
| ZN341_HUMAN | 2.82 | -5.34 | 2.00 | n/a | No Hit |
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Motif analysis
