rs6674162 chr1:181100977 G>C

Sequence
gaatacttaacccagacagagtgt[G/C]agggaagggttcctgcgaagagga
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
RBM25_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RBM25_HUMAN 0.84 -1.96 2.9·10-31.00 1.50 n/a n/a
IKZF1_HUMAN 1.65 -0.56 0.041.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Hypothalamus

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