rs6674224 chr1:54070337 A>T
- Sequence
agtttatgacatgtatatgtgtac[A/T]tatgtatatgtatatagttaagca
- ASB in cell types
- LNCaP (prostate carcinoma) adult erythroblasts hASC (preadipocytes) CD34+ stem cells-derived erythroblasts
- ASB for transcription factors
- FOXA1_HUMAN KDM6A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.36 | -0.71 | 1.50 | 0.30 | Weak Discordant | |||
| KDM6A_HUMAN | 1.83 | n/a | 3.00 | n/a | n/a |
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Motif analysis
