rs6674367 chr1:211512071 C>T
- Sequence
cgagatgtcctgttccttactagc[C/T]aagggtgggtgtgaagccaagcct
- ASB in cell types
- breast tumor BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- PRGR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PRGR_HUMAN | 2.46 | -4.69 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Skin_Not_Sun_Exposed_Suprapubic, Testis