rs6675370 chr1:31818647 T>A

Sequence
aacgggagtggagatgttgtcagt[T/A]ccacatggtatagagataaagaat
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN 2.15 -0.17 0.031.00 1.25 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration,  height,  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Esophagus_Mucosa,  Heart_Atrial_Appendage,  Nerve_Tibial,  Pituitary,  Prostate,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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