rs6675402 chr1:109948590 C>T

Sequence
cagcaacatataagtacctgtttc[C/T]ccacagttctgttaacatgggatt
ASB in cell types
LN95(Prostate adenocarcinoma)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
LN95(Prostate adenocarcinoma) 1.77 -3.10 3.0·10-31.00 1.50
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Motif analysis

No data available

Genetic associations

EMBL-EBI smoking initiation (ever regular vs never regular) (mtag)
GTEx eQTL Adipose_Subcutaneous Artery_Aorta Nerve_Tibial Skin_Sun_Exposed_Lower_leg Thyroid

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