ADASTRA v6.1.0
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rs6675421
chr1:244864047
C
>
T
Sequence
tccttcctcctcctcttcctcttc[C/T]tcctcctcttcatcgccgccggcc
ASB in cell types
HEK293 (embryonic kidney)
primary B-CLL cells
SEM (childhood B acute lymphoblastic leukemia)
MV-4-11 (Childhood acute monocytic leukemia)
ASB for transcription factors
BRD4_HUMAN
NXF1_HUMAN
ENL_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRD4_HUMAN
1.48
0.35
3.2·10
-5
1.00
1.58
n/a
n/a
NXF1_HUMAN
n/a
2.29
1.00
6.4·10
-4
2.00
n/a
n/a
ENL_HUMAN
1.30
0.15
0.03
1.00
2.00
n/a
n/a
Items per page:
5
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Nerve_Tibial
,
Testis
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)