rs6675979 chr1:4007992 G>A
- Sequence
ttataacctaatctcagaggtgac[G/A]tcacccttttgccagatgatcaca
- ASB in cell types
- K562 (myelogenous leukemia) germinal center B-cells
- ASB for transcription factors
- ATF7_HUMAN ATF3_HUMAN ATF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF7_HUMAN | 2.08 | -1.84 | 1.25 | -1.49 | Weak Concordant | |||
| ATF3_HUMAN | 2.61 | -2.37 | 2.50 | -0.57 | Weak Concordant | |||
| ATF2_HUMAN | 2.63 | -5.27 | 3.00 | 1.02 | Weak Discordant |
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Motif analysis
