rs6676219 chr1:180633745 A>G

Sequence
ctgcagagttgatttattgtttct[A/G]ataacatttagttttaaaaccttg
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
NFIC_HUMAN PKNX1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NFIC_HUMAN n/a 2.36 1.001.4·10-6 3.00 n/a No Hit
PKNX1_HUMAN n/a 2.35 1.005.8·10-3 3.00 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd obesity with early age of onset (age >2)
GTEx eQTL Esophagus_Mucosa

Download