rs6676785 chr1:173175878 A>G
- Sequence
tttgttggcgcatacatgagttcc[A/G]ttttcaattgacactaaactaaca
- ASB in cell types
- MDM(monocyte derived macrophages)
- ASB for transcription factors
- SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 0.43 | 2.13 | 1.70 | 2.47 | Concordant |
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Motif analysis
Genetic associations
GRASP acute lung injury following major trauma, mitral annular calcium, narcolepsy (non-hla narcolepsy), recurrent early onset major depressive disorder, recurrent early onset major depressive disorder (females)
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Nerve_Tibial