rs6677265 chr1:8890661 C>T
- Sequence
gcgatctcagctcactgcagtctc[C/T]gcctcccaggttcatgccattctc
- ASB in cell types
- renal cortex 22RV1 (prostate carcinoma) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CREB1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CREB1_HUMAN | 3.12 | n/a | 1.00 | n/a | No Hit | |||
| ANDR_HUMAN | 2.22 | -1.42 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Thyroid, Whole_Blood