rs6677613 chr1:15230028 G>A
- Sequence
ggtaaccctgacatggggcaaggc[G/A]tggctaggtggaaggctgctctgt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF7L-P(immortalized breast epithelial cell line)
- ASB for transcription factors
- ESR1_HUMAN FOXA1_HUMAN GATA3_HUMAN ELF1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.28 | 0.42 | 2.12 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.92 | 0.44 | 2.41 | n/a | No Hit | |||
| GATA3_HUMAN | 1.82 | n/a | 2.00 | n/a | No Hit | |||
| ELF1_HUMAN | 2.46 | n/a | 2.00 | n/a | No Hit |
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