rs6677618 chr1:32815516 T>C

Sequence
gttaagactaagttgtaaatggaa[T/C]aacccaaatgtccatcaactgatg
ASB in cell types
K562 (myelogenous leukemia)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 0.68 0.89 0.836.2·10-9 1.02
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Lung,  Muscle_Skeletal,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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