rs6677782 chr1:190869474 A>T
- Sequence
gtagtaaaataattattactggta[A/T]aaaaagagtgaatatttgtgttta
- ASB in cell types
- naive endoderm
- ASB for transcription factors
- CDX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDX2_HUMAN | -2.06 | 2.33 | 1.00 | 2.66 | Concordant |
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Motif analysis
