rs6679004 chr1:153119648 C>A

Sequence
actgttgctatgtaaccaagatgg[C/A]cgttatctaggtttgccctagtgc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
RING2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RING2_HUMAN 2.72 -4.94 0.041.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease,  total cholesterol
GTEx eQTL Adipose_Visceral_Omentum,  Artery_Aorta,  Breast_Mammary_Tissue,  Cells_EBV-transformed_lymphocytes,  Esophagus_Mucosa,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis

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