rs6680302 chr1:36187939 G>A

Sequence
agaactggcccaggctgcagggag[G/A]tagcctccaggtctgatttcctgg
ASB in cell types
K562 (myelogenous leukemia)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 0.85 0.75 2.4·10-38.2·10-4 1.02
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels,  comorbid depressive syndrome and alcohol dependence,  diabetic retinopathy in type 2 diabetes mellitus,  height
GTEx eQTL Adipose_Visceral_Omentum,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Muscle_Skeletal,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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