rs6680566 chr1:21902597 T>C

Sequence
caggactcccctctgctgggttca[T/C]gcttctgtatttggctagctcaga
ASB for transcription factors
STAT1_HUMAN COT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 1.62 -0.25 0.031.00 1.00 n/a No Hit
COT1_HUMAN -1.61 2.18 1.000.03 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP abnormal involuntary movement scale,  barnes akathisia rating scale,  bipolar disorder,  cystatin c in serum,  height,  major depressive disorder,  recurrent early onset major depressive disorder,  recurrent early onset major depressive disorder (females),  tardive dyskinesia
GTEx eQTL Pancreas,  Thyroid,  Whole_Blood

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