rs6680621 chr1:30854119 G>T

Sequence
acatatcaaccattaaaggctggt[G/T]ctccttggcataggggacccaagt
ASB in cell types
K562 (myelogenous leukemia) HEK293 (embryonic kidney)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 0.86 0.90 9.4·10-54.2·10-6 1.04
HEK293 (embryonic kidney) -0.10 0.66 1.004.1·10-3 2.00
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration advanced age-related macular degeneration (choroidal neovascularization) vs. no amd fasting blood glucose homa-ir prop taste detection threshold salmonella-induced pyroptosis
GTEx eQTL Nerve_Tibial

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