rs6682221 chr1:203305408 C>A

Sequence
gcgccggagcggggccgagcggag[C/A]ggctccgggccccgcccccatcct
ASB in cell types
22RV1 (prostate carcinoma) HepG2 (hepatoblastoma) SUM159PT (Triple negative breast cancer)
ASB for transcription factors
ANDR_HUMAN TYY1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN -4.79 2.60 1.009.1·10-4 2.00 n/a No Hit
TYY1_HUMAN -5.04 2.96 1.001.8·10-3 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Skin_Sun_Exposed_Lower_leg

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