rs6682353 chr1:223846090 A>G
- Sequence
gcgcctgcgcgggcccggctgggt[A/G]gacggggagcggcgggagccggcc
- ASB in cell types
- A549 (lung carcinoma) MOLT-4 (Adult T acute lymphoblastic leukemia) GM19099 (female B-cells Lymphoblastoid Cell Lines) HCT-116 (colon carcinoma)
- ASB for transcription factors
- SPT5H_HUMAN TBP_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPT5H_HUMAN | -0.47 | 1.81 | 1.00 | n/a | n/a | |||
| TBP_HUMAN | 1.36 | -0.27 | 1.50 | n/a | No Hit |
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