rs6684163 chr1:175252738 T>G
- Sequence
ttgatctaagctagttaatatagt[T/G]tcacttgccaaatgactgttgaac
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ZN217_HUMAN NFAC3_HUMAN IKZF2_HUMAN TADBP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN217_HUMAN | 4.06 | -4.05 | 1.00 | n/a | n/a | |||
| NFAC3_HUMAN | 2.97 | -2.63 | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.52 | -3.77 | 2.00 | n/a | n/a | |||
| TADBP_HUMAN | 2.94 | -3.02 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 1.60 | -1.60 | 2.00 | n/a | n/a |
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